Serveur d'exploration sur l'oranger

Attention, ce site est en cours de développement !
Attention, site généré par des moyens informatiques à partir de corpus bruts.
Les informations ne sont donc pas validées.

DNA amplified fingerprinting, a useful tool for determination of genetic origin and diversity analysis in Citrus

Identifieur interne : 000245 ( France/Analysis ); précédent : 000244; suivant : 000246

DNA amplified fingerprinting, a useful tool for determination of genetic origin and diversity analysis in Citrus

Auteurs : F. Luro [France] ; F. Laigret [France] ; J.-M. Bove [France] ; P. Ollitrault [France]

Source :

RBID : Pascal:95-0500201

Descripteurs français

English descriptors

Abstract

We used three short repetitive nucleotide sequences [(GTG)5, (TCC)5, and (GACA)4] either as radiolabeled probes for hybridization with restricted citrus DNA or as single primers in polymerase chain reaction amplification experiments with total genomic DNA. We tested the ability of the sequences to discriminate between seedlings of zygotic or nucellar origin in the progeny of a Volkamer lemon (Citrus volkameriana Ten. & Pasq.) tree. The genetic variability within two species [Citrus sinensis (L.) Osbeck (sweet oranges) and Citrus reticulata Blanco and relatives (mandarins)] also was evaluated. DNA amplified fingerprinting with single primers was the more successful technique for discriminating between nucellar and zygotic seedlings. Although we were not able to distinguish among 10 cultivars of C. sinensis, all 10 C. reticulata cultivars tested were distinguishable. However, it still is difficult to identify the putative parents of a hybrid plant when the two parental genomes are closely related.


Affiliations:


Links toward previous steps (curation, corpus...)


Links to Exploration step

Pascal:95-0500201

Le document en format XML

<record>
<TEI>
<teiHeader>
<fileDesc>
<titleStmt>
<title xml:lang="en" level="a">DNA amplified fingerprinting, a useful tool for determination of genetic origin and diversity analysis in Citrus</title>
<author>
<name sortKey="Luro, F" sort="Luro, F" uniqKey="Luro F" first="F." last="Luro">F. Luro</name>
<affiliation wicri:level="1">
<inist:fA14 i1="01">
<s1>INRA, cent. coopération internationale rech. agronomique développement-fruits légumes horticoles, stn. rech. agronomique Corse</s1>
<s2>20230 San Nicolao</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>20230 San Nicolao</wicri:noRegion>
<wicri:noRegion>stn. rech. agronomique Corse</wicri:noRegion>
<wicri:noRegion>20230 San Nicolao</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Laigret, F" sort="Laigret, F" uniqKey="Laigret F" first="F." last="Laigret">F. Laigret</name>
<affiliation wicri:level="3">
<inist:fA14 i1="02">
<s1>INRA Univ. Bordaux II, lab. biologie cellulaire moléculaire</s1>
<s2>33883 Villenave d'Ornon</s2>
<s3>FRA</s3>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
</inist:fA14>
<country>France</country>
<placeName>
<region type="region" nuts="2">Nouvelle-Aquitaine</region>
<region type="old region" nuts="2">Aquitaine</region>
<settlement type="city">Villenave d'Ornon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Bove, J M" sort="Bove, J M" uniqKey="Bove J" first="J.-M." last="Bove">J.-M. Bove</name>
<affiliation wicri:level="3">
<inist:fA14 i1="02">
<s1>INRA Univ. Bordaux II, lab. biologie cellulaire moléculaire</s1>
<s2>33883 Villenave d'Ornon</s2>
<s3>FRA</s3>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
</inist:fA14>
<country>France</country>
<placeName>
<region type="region" nuts="2">Nouvelle-Aquitaine</region>
<region type="old region" nuts="2">Aquitaine</region>
<settlement type="city">Villenave d'Ornon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Ollitrault, P" sort="Ollitrault, P" uniqKey="Ollitrault P" first="P." last="Ollitrault">P. Ollitrault</name>
<affiliation wicri:level="3">
<inist:fA14 i1="03">
<s1>cent. coopération internationale rech. agronomique développement-fruits légumes horticoles</s1>
<s2>34032 Montpellier</s2>
<s3>FRA</s3>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
<placeName>
<region type="region" nuts="2">Occitanie (région administrative)</region>
<region type="old region" nuts="2">Languedoc-Roussillon</region>
<settlement type="city">Montpellier</settlement>
</placeName>
</affiliation>
</author>
</titleStmt>
<publicationStmt>
<idno type="wicri:source">INIST</idno>
<idno type="inist">95-0500201</idno>
<date when="1995">1995</date>
<idno type="stanalyst">PASCAL 95-0500201 INIST</idno>
<idno type="RBID">Pascal:95-0500201</idno>
<idno type="wicri:Area/PascalFrancis/Corpus">000C05</idno>
<idno type="wicri:Area/PascalFrancis/Curation">001306</idno>
<idno type="wicri:Area/PascalFrancis/Checkpoint">000C13</idno>
<idno type="wicri:doubleKey">0018-5345:1995:Luro F:dna:amplified:fingerprinting</idno>
<idno type="wicri:Area/Main/Merge">003919</idno>
<idno type="wicri:Area/Main/Curation">003645</idno>
<idno type="wicri:Area/Main/Exploration">003645</idno>
<idno type="wicri:Area/France/Extraction">000245</idno>
</publicationStmt>
<sourceDesc>
<biblStruct>
<analytic>
<title xml:lang="en" level="a">DNA amplified fingerprinting, a useful tool for determination of genetic origin and diversity analysis in Citrus</title>
<author>
<name sortKey="Luro, F" sort="Luro, F" uniqKey="Luro F" first="F." last="Luro">F. Luro</name>
<affiliation wicri:level="1">
<inist:fA14 i1="01">
<s1>INRA, cent. coopération internationale rech. agronomique développement-fruits légumes horticoles, stn. rech. agronomique Corse</s1>
<s2>20230 San Nicolao</s2>
<s3>FRA</s3>
<sZ>1 aut.</sZ>
</inist:fA14>
<country>France</country>
<wicri:noRegion>20230 San Nicolao</wicri:noRegion>
<wicri:noRegion>stn. rech. agronomique Corse</wicri:noRegion>
<wicri:noRegion>20230 San Nicolao</wicri:noRegion>
</affiliation>
</author>
<author>
<name sortKey="Laigret, F" sort="Laigret, F" uniqKey="Laigret F" first="F." last="Laigret">F. Laigret</name>
<affiliation wicri:level="3">
<inist:fA14 i1="02">
<s1>INRA Univ. Bordaux II, lab. biologie cellulaire moléculaire</s1>
<s2>33883 Villenave d'Ornon</s2>
<s3>FRA</s3>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
</inist:fA14>
<country>France</country>
<placeName>
<region type="region" nuts="2">Nouvelle-Aquitaine</region>
<region type="old region" nuts="2">Aquitaine</region>
<settlement type="city">Villenave d'Ornon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Bove, J M" sort="Bove, J M" uniqKey="Bove J" first="J.-M." last="Bove">J.-M. Bove</name>
<affiliation wicri:level="3">
<inist:fA14 i1="02">
<s1>INRA Univ. Bordaux II, lab. biologie cellulaire moléculaire</s1>
<s2>33883 Villenave d'Ornon</s2>
<s3>FRA</s3>
<sZ>2 aut.</sZ>
<sZ>3 aut.</sZ>
</inist:fA14>
<country>France</country>
<placeName>
<region type="region" nuts="2">Nouvelle-Aquitaine</region>
<region type="old region" nuts="2">Aquitaine</region>
<settlement type="city">Villenave d'Ornon</settlement>
</placeName>
</affiliation>
</author>
<author>
<name sortKey="Ollitrault, P" sort="Ollitrault, P" uniqKey="Ollitrault P" first="P." last="Ollitrault">P. Ollitrault</name>
<affiliation wicri:level="3">
<inist:fA14 i1="03">
<s1>cent. coopération internationale rech. agronomique développement-fruits légumes horticoles</s1>
<s2>34032 Montpellier</s2>
<s3>FRA</s3>
<sZ>4 aut.</sZ>
</inist:fA14>
<country>France</country>
<placeName>
<region type="region" nuts="2">Occitanie (région administrative)</region>
<region type="old region" nuts="2">Languedoc-Roussillon</region>
<settlement type="city">Montpellier</settlement>
</placeName>
</affiliation>
</author>
</analytic>
<series>
<title level="j" type="main">HortScience</title>
<title level="j" type="abbreviated">HortScience</title>
<idno type="ISSN">0018-5345</idno>
<imprint>
<date when="1995">1995</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt>
<title level="j" type="main">HortScience</title>
<title level="j" type="abbreviated">HortScience</title>
<idno type="ISSN">0018-5345</idno>
</seriesStmt>
</fileDesc>
<profileDesc>
<textClass>
<keywords scheme="KwdEn" xml:lang="en">
<term>Citrus reticulata</term>
<term>Citrus sinensis</term>
<term>Citrus volkameriana</term>
<term>Cultivar</term>
<term>DNA</term>
<term>Fingerprint method</term>
<term>Gene amplification</term>
<term>Genetic diversity</term>
<term>Genetic variability</term>
<term>Laboratory study</term>
<term>Polymerase chain reaction</term>
<term>Repeated sequence</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr">
<term>Etude en laboratoire</term>
<term>Variabilité génétique</term>
<term>Séquence répétée</term>
<term>Méthode fingerprint</term>
<term>Amplification génique</term>
<term>Réaction chaîne polymérase</term>
<term>Cultivar</term>
<term>Citrus volkameriana</term>
<term>Citrus sinensis</term>
<term>Citrus reticulata</term>
<term>DNA</term>
<term>Diversité génétique</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front>
<div type="abstract" xml:lang="en">We used three short repetitive nucleotide sequences [(GTG)5, (TCC)5, and (GACA)4] either as radiolabeled probes for hybridization with restricted citrus DNA or as single primers in polymerase chain reaction amplification experiments with total genomic DNA. We tested the ability of the sequences to discriminate between seedlings of zygotic or nucellar origin in the progeny of a Volkamer lemon (Citrus volkameriana Ten. & Pasq.) tree. The genetic variability within two species [Citrus sinensis (L.) Osbeck (sweet oranges) and Citrus reticulata Blanco and relatives (mandarins)] also was evaluated. DNA amplified fingerprinting with single primers was the more successful technique for discriminating between nucellar and zygotic seedlings. Although we were not able to distinguish among 10 cultivars of C. sinensis, all 10 C. reticulata cultivars tested were distinguishable. However, it still is difficult to identify the putative parents of a hybrid plant when the two parental genomes are closely related.</div>
</front>
</TEI>
<affiliations>
<list>
<country>
<li>France</li>
</country>
<region>
<li>Aquitaine</li>
<li>Languedoc-Roussillon</li>
<li>Nouvelle-Aquitaine</li>
<li>Occitanie (région administrative)</li>
</region>
<settlement>
<li>Montpellier</li>
<li>Villenave d'Ornon</li>
</settlement>
</list>
<tree>
<country name="France">
<noRegion>
<name sortKey="Luro, F" sort="Luro, F" uniqKey="Luro F" first="F." last="Luro">F. Luro</name>
</noRegion>
<name sortKey="Bove, J M" sort="Bove, J M" uniqKey="Bove J" first="J.-M." last="Bove">J.-M. Bove</name>
<name sortKey="Laigret, F" sort="Laigret, F" uniqKey="Laigret F" first="F." last="Laigret">F. Laigret</name>
<name sortKey="Ollitrault, P" sort="Ollitrault, P" uniqKey="Ollitrault P" first="P." last="Ollitrault">P. Ollitrault</name>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Wicri/Bois/explor/OrangerV1/Data/France/Analysis
HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000245 | SxmlIndent | more

Ou

HfdSelect -h $EXPLOR_AREA/Data/France/Analysis/biblio.hfd -nk 000245 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Wicri/Bois
   |area=    OrangerV1
   |flux=    France
   |étape=   Analysis
   |type=    RBID
   |clé=     Pascal:95-0500201
   |texte=   DNA amplified fingerprinting, a useful tool for determination of genetic origin and diversity analysis in Citrus
}}

Wicri

This area was generated with Dilib version V0.6.25.
Data generation: Sat Dec 3 17:11:04 2016. Site generation: Wed Mar 6 18:18:32 2024